E-health data collection key to tracking swine flu spread November 6, 2009
Posted by gonzalezloumiet in Pandemic Flu.Tags: Biosense, CDC, H1N1, NEDSS, Orion, Rhapsody, Texas
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As health agencies rush to analyze data, some companies prep for a pandemic
Lucas Mearian
April 29, 2009 (Computerworld) As the prospect of a flu pandemic grew more likely Wednesday — the World Health Organization raised its threat alert to Level 5 — data is pouring into federal health care agencies using systems that a decade ago did not even exist.
As of Wednesday afternoon, the U.S. Centers for Disease Control and Prevention (CDC) had reported 91 cases of swine flu in 10 states. One death in Texas — a 23-month-old child from Mexico — has been attributed to the flu, and health officials expect more deaths to follow.
The swiftness with which the influenza strain has spread — and the speed with which new electronic health surveillance systems have tracked its emergence — is prompting companies to quickly dust off business continuity plans and warn workers to guard their health.
"Businesses need to take this seriously and put plans in place for personnel," said Michael Croy, director of business continuity solutions at Forsythe Solutions Group Inc., an IT consulting firm in Skokie, Ill. "They need to make sure employees can work from home. They need to tell them about how to take care of their health and be overly cautious by telling workers to stay home if they feel sick. But they also need to do it in way so as not to create panic."
The best antidote for panic is information, and disease-surveillance systems rolled out in recent years are allowing health agencies to track, report and confirm swine flu cases faster than ever. But gaps in the system remain, health care experts said.
While today’s electronic reporting systems are vastly more sophisticated than the paper-based methods used as recently as 10 years ago, many community hospitals and private physicians are still not equipped to correlate all the data coming from health providers, insurance companies and laboratories.
"We’ve gone beyond the early detection," said Doug Hamaker, who manages the data collection for infectious reportable conditions at the Texas Department of State Health Services. "I don’t think there’s a local health department around that’s not aware of the swine flu and is not aware that it either is or could easily be occurring in their local area. What we’re transitioning over to now is the use of a case-surveillance system that says for those who have an influenza-like illness … is that the swine flu variant?"
For at least 100 years, the U.S. government has required states to report potential epidemics. That system was traditionally paper-based, and it could take days, if not weeks, for information to trickle up to the CDC in Atlanta and the U.S. Department of Health and Human Services (HHS), which coordinate health care and epidemic response on a national basis.
Accuracy in reporting remains a problem, because it depends on the sophistication of electronic systems used by local and state health agencies to quickly gather data for the federal government.
In the past few years, electronic tools have begun to transform the reporting system — reducing or eliminating the burden on doctors, nurses or medical laboratories to fill out reports on potential epidemics, according to Scott Danos, an independent consultant in Atlanta.
Danos, a former senior adviser at the CDC who retired after more than 30 years with the agency, said the basic challenge in tracking epidemics has been that patient diagnosis and treatment data comes in many forms to the local and state health agencies, which in turn must hand it off to the CDC and HHS. Those agencies have to analyze the data and then send back information to the states.
About four years ago, the CDC launched a national program called BioSense, which gave state health agencies an application that can transmit and receive epidemic data with federal agencies in near real time. The data, which comes from larger hospitals, laboratories and other health data sources, is compiled by the CDC and offers states a big-picture view of where a potential epidemic may be spreading.
For example, if a number of people going to hospitals with flu-like symptoms — or if there’s a run on a particular type of medical test — that data is reported through BioSense to the CDC from the state health agencies. The CDC then cross-references that information with data it receives from large national health care providers, pharmacies and other government agencies such as the U.S. Department of Veterans Affairs.
"They then overlay it in sophisticated ways in Atlanta along with views back to every state so they can go in and query it to see what’s happening where they are," Danos said. But there is no precise data about individual patients and whether specific cases of swine flu have been confirmed. And out of the approximately 7,500 hospitals in the U.S., only several hundred are feeding into the CDC’s BioSense health data network.
In 2004, federal officials rolled out the National Electronic Disease Surveillance System (NEDSS), which allows the exchange of specific, standards-based health data using secure Internet connections. The system data includes patient names, test results, diagnoses and treatments. To boost interoperability, NEDSS relies on standardized reporting templates that can be used with commercial software and minimizes proprietary data. Each state chooses the applications it uses to gather health care data so it can be collected in a central state-level database.
The electronic reports are far more accurate than the paper-based reports of earlier decades because of the standardization of data formats, Danos said. All states are moving toward the use a NEDSS-compliant system, according to Danos, but not all hospitals, medical laboratories or private physician practices are yet on board with the system. Just 16 states are currently live on the NEDSS reporting system.
"We have made great advancements over the last five to 10 years," said Hamaker, who is the NEDSS coordinator at the Texas Department of State Health Services. "But there’s always going to be room for improvement. There will always be new technologies and new capabilities. Am I satisfied where we are? I’m impressed in relationship to where we’ve come."
Texas and the other 15 other states on NEDSS use a product called Orion Health Rhapsody Integration Engine from Orion Health Inc., which normalizes the data coming in from health facilities for use in regional and state systems and then feeds it through the NEDSS system to the CDC.
That’s the same system a hospital will use to accept data from various departments and make it accessible in a patient’s electronic health record.
While the U.S. has moved forward with new health data surveillance systems, other countries such as Mexico don’t have systems that are as sophisticated. Without accurate reporting, epidemics can spread unchecked, even if some cases are reported up the government chain.
"We do have a lot of concern about Mexican disease surveillance — especially in a country that doesn’t have some of the penetration of high-technology surveillance systems that the U.S. has," Danos said.
Uber Operations and Pandemic Influenza: http://blog.uberops.com/2009/04/27/pandemic-flu-uber-operations/
CDC expands flu-tracking efforts October 26, 2009
Posted by gonzalezloumiet in Nationwide Health Information Network.Tags: CDC, NHIN
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New initiatives track and share information on the pandemic flu
- By Alice Lipowicz
- Oct 21, 2009
Also in this report
With the pandemic H1N1 flu spreading rapidly this year, officials at the Centers for Disease Control and Prevention have been aggressively expanding their information technology toolkit to provide better, faster and more in-depth data on the virus, also known as swine flu.
The virus has created an urgent need for public health authorities to track where and how quickly the illness is spreading. The Centers for Disease Control and Prevention, along with some state agencies and private entities, have responded to the challenge with new IT initiatives.
On Sept. 1, CDC began securely exchanging public health data daily via the Nationwide Health Information Network. The pilot project is gathering flu symptom data from health care providers in Indiana, New York and Washington state.
The flu data exchange is a new use for the NHIN, itself a pilot project of the Health and Human Services Department’s Office of the National Coordinator for Health IT.
“We are supporting the use of the NHIN for biosurveillance,” said Dr. Charles Magruder, senior adviser for health information exchange activities at CDC’s for Public Health Informatics and leader of the agency’s NHIN pilot project. “It has the potential to be a broad and robust system.”
The NHIN eventually will be used for national health data exchange, but is currently a platform for several demonstration projects, including one involving the Social Security Administration and MedVirginia, a regional network of health care providers, to exchange patient medical information for determining disability benefits eligibility. It will soon be accepting data from the Veterans Affairs and Defense departments.
CDC worked with Harris and Cisco Systems to demonstrate that it could upload flu symptom data from three state health departments in a timely fashion. Researchers then aggregate and analyze the information looking for trends and make the results available to state public health officials.
The data includes clinical information on patients’ symptoms, lab results, geographic information, age and gender, Magruder said. The data has been stripped of all personally identifiable information and is put into a format that both NHIN and the CDC can work with.
One of the key advantages to using NHIN is timeliness, Magruder said. Since Sept. 1, CDC has received new H1N1 data daily.
“We are showing how the biosurveillance use case can be demonstrated in a standards-based and interoperable system,” he said. “One of the motivators for the project is to show that existing standards can facilitate the sharing of data. The NHIN is a key component of developing those capabilities.”
“I am very impressed with what the NHIN has to offer in terms of enhancing our capabilities to collect and move this type of data,” he added.
The three states’ health departments are linked to CDC through the Connect gateway software developed by HHS. The agency’s partners in the project include the New York eHealth Collaborative, Indiana’s Regenstrief Institute and Science Applications International Corp. under a contract with Washington state, Magruder said.
Once the program has been fully evaluated, CDC might expand it to include other states and diseases, he added.
CDC also partnered with the International Society for Disease Surveillance and the Public Health Informatics Institute to create a new tracking system, called Distribute, that aggregates nationwide data from state and local health departments on emergency room patients with flu symptoms.
Distribute provides the CDC with further detail on geographic and age-specific trends, officials said. For example, in the Washington, D.C., area, Distribute reports that between Sept. 13 and Oct. 11, the number of emergency room visits related to flu symptoms more than doubled — from 2.3 percent to 4.7 percent.
Other initiatives
CDC is also working with two other initiatives that began monitoring H1N1 flu activity this year: Cerner’s Flu Pandemic Initiative and the GeoSentinel global flu and disease tracking system established at the University of Alabama at Birmingham.
The initiatives complement existing CDC surveillance systems, including BioSense, the National Electronic Disease Surveillance System and the Influenza-Like Illness Surveillance Network.
CDC worked with health IT vendor Cerner to set up a national electronic swine flu tracking system. It takes advantage of Cerner’s network of lab, doctor and hospital clients, which spans as much as 30 percent of the country’s health care system. HHS Secretary Kathleen Sebelius called Cerner’s flu network a whole new model for disease monitoring when she spoke in Kansas City, Mo., Oct. 14 at a conference sponsored by Cerner.
The system, which began operating several weeks ago, is receiving data from about 1,000 hospitals, doctors and labs, said Kelli Christman, a Cerner spokeswoman.
The company set up the system voluntarily and sends results to CDC on a daily basis. The goal is to provide CDC and other clients with real-time information on hot spots of flu activity to help with preparedness efforts.
“We are providing a free service to enhance situational awareness,” Christman said. The system can be expanded to cover additional diseases or health events, such as negative reactions to vaccines, and the data can be customized to reflect activity in a specific region, she added.
The GeoSentinel network takes a global approach by connecting 48 clinics on several continents to track emerging diseases, including H1N1 flu, which first appeared in Mexico and spread worldwide within six weeks.
Unlike traditional flu surveillance systems, GeoSentinel tracks where patients got sick, not where they live.
"GeoSentinel is showing us travelers and mobile populations getting the flu," said Dr. David Freedman, co-director of GeoSentinel. "We are tracking which countries and places have intense enough transmission that they are then exporting flu and potentially seeding other countries.”
About the Author
Alice Lipowicz is a staff writer for Federal Computer Week.
PHLIP RNR HUB Presentation at the CDC’s PHIN Conference 2009 September 29, 2009
Posted by gonzalezloumiet in APHL, CDC, Eduardo Gonzalez Loumiet, Interalle, Labpoint, Nebraska, Uber Operations.Tags: APHL, CDC, Eduardo Gonzalez Loumiet, RNR
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Abstract Submission:
PHLIP, the Public Health Laboratory Interoperability Project, surfaced from the laboratory community with the mission to address the need to exchange laboratory orders and results electronically. As the PHLIP initiative matures, many more data exchange partners are expected to participate and apply the standardized content and message structure developed through the PHLIP workgroups. To exchange data between these partners, a direct send PHINMS connection is established between each organization. Although Direct Send is a feasible, secure method of exchanging data, the addition of each new node to the community results in exponential growth of direct connections and maintenance.
Under the direction of the PHLIP steering committee, a pilot project was established to document the requirements for centralized data exchange to meet the growing data exchange needs of the PHLIP community. The requirements pointed to the establishment of two interoperable Route not Read (RnR) hubs. The established RnR workgroup developed a timeline to implement two RnR hubs, one at the Florida Department of Health and one at the Nebraska Public Health Laboratory. The move towards utilizing a multi-hub architecture will reduce the overhead of the Direct Send model by reducing the number of connections for intercommunication of nodes, ease the impact of firewall rules when connecting to trading partners and will make maintenance tasks simpler, such as certificate management. Dual interoperability techniques were developed during the project, one of these solutions is a web services approach to connect the two hubs. Web Services is the basis of NHINs connectivity strategy, so the use of this interoperability technique will position the PHLIP group to take advantage of and participate in national network activity.
This presentation will outline the accomplishments by both Nebraska and Florida to deploy these hubs, and the teams approach to collaboration on information exchange technology, standards, and interoperability.
CDC begins to collect flu data through NHIN September 29, 2009
Posted by gonzalezloumiet in CDC, NHIN.Tags: CDC, NHIN
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By Mary Mosquera
Friday, September 25, 2009
The Centers for Disease Control and Prevention has begun to receive public health reports about cases of H1N1 flu from New York, Indiana and Washington states through the nationwide health information network (NHIN) system.
Dr. Charles Magruder, senior advisor for health information exchange at CDC’s National Center for Public Health Informatics, said the three states’ health departments are linked to CDC through the Connect gateway, health information exchange software developed by a handful of federal agencies.
Connect allows organizations to share health information according to the standards and formats developed for the NHIN. The state agencies use it to relay summarized reports to CDC about incidents of H1N1 flu.
“Now the CDC has the capability to summarize all that summarized, de-identified H1N1 data at the federal level to further examine that,” Magruder said.
He spoke at a demonstration of the project Sept. 24 during Health IT Week sponsored by the Healthcare Information and Management Systems Society (HIMSS). HIMSS also owns Government Health IT.
The state health departments electronically collect patient-level flu data from emergency departments and physicians through the assistance of health information exchanges, which can convert clinical information into a standard format.
The data flow not only from the states but from CDC back to the state health departments, he said. The use of health IT in this manner helps foster public health situational awareness, Magruder noted.
“If we see something of concern, we have an alert network by which we can take the information that we have, and again take it through a standardized process, and inform state health departments and other public health organizations of our findings so they can take quick action,” Magruder said.
Using live data, Magruder demonstrated an interactive map that uses a color-coding scheme to show the number of H1N1 cases across the three states. The map showed a concentration of cases in Spokane and Yakima, Wash.
The map also has the ability to illustrate flu cases nationally or at the local level by demographic variables, over time and across geography, Magruder said.
CDC Readies Internet Barrage To Combat Swine Flu August 24, 2009
Posted by gonzalezloumiet in CDC, H1N1.Tags: CDC, H1N1
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The U.S. Centers for Disease Control uses a range of Internet services, including Twitter, YouTube, and even games, to help spread flu-protection messages.
By Mitch Wagner, InformationWeek
Aug. 24, 2009
URL: http://www.informationweek.com/story/showArticle.jhtml?articleID=219401216
The Centers for Disease Control is preparing several electronic remedies to head off the spread of the H1N1 flu virus. The agency is planning to make use of Twitter, YouTube videos, and text messaging, as well as more traditional tools like e-mail blasts and Web pages. The goal is to saturate the Internet with information about how people can protect themselves against the flu.
The CDC is gearing up its efforts with the approach of autumn, and the flu season, and the possibility of a resurgence of the swine flu virus.
Central to the campaign is putting information on other Web sites, rather than requiring people to come to CDC.gov for information, said Janice Nall, director of the CDC’s e-health marketing division. "We’re trying to reach people where they are, not necessarily expecting them to come to us," she said. "All of our distribution is on channels that people are already using."
The agency has had some good experience with this approach, Nall said. H1N1 videos on CDC.gov have gotten about 100,000 page views, but the same videos on YouTube got 2.01 million views.
People look for videos on YouTube but not necessarily on the CDC.gov site. The videos are "nothing fancy," Nall said, some are just talking heads. "It’s not like they’re exciting, sexy videos," she said. "We’re just trying to get the content out in video format."
This philosophy of bringing information to places on the Internet where people are, rather than requiring people to come to CDC.gov, pervades the CDC’s electronic strategy. Other efforts include:
Widgets and content syndication: The CDC has built widgets that people can embed on their own Web pages, providing tips on H1N1 prevention. Schools are finding it useful to embed the widgets on their own sites, to inform their constituents. Likewise, automated syndication lets a Web site publisher include the latest H1N1 information on their Web site, in a style that conforms to the look of the site, without any further update once the syndication tools are installed.
Graphical buttons: The CDC is distributing graphical buttons reminding people to take basic health precautions, such as covering their mouths when they cough. People can embed the buttons on social networking sites, including MySpace and Facebook.
Twitter: The CDC has several Twitter feeds, with a total of 700,000 followers, for releasing health information. Popularity of the feeds increases exponentially during flu season.
E-mail: E-mail updates are available from the CDC via GovDelivery, a federal e-mail alert service. The agency has a federal employee mailing list for H1N1 alerts with more than 200,000 subscribers. It’s also building tools to send alerts out to all government e-mail list subscribers, a whopping 13 million addresses.
Texting: The CDC is piloting texting health alerts.
Blogger outreach: The agency is planning to hold Webinars targeted at independent bloggers, in the hopes that they’ll help get the information out when necessary. It’s targeting bloggers who focus on parenting issues–aka "Mommybloggers"–as well as those who focus on health issues.
Information on and links to all the CDC’s social media campaigns are available on an overview page at CDC.gov. Of the CDC’s e-health marketing group’s about 35 full-time staffers, three or four are working on social media.
Social media is especially important in cases of the H1N1 virus because it strikes young adults particularly hard compared with other flus, which are generally most dangerous to the very old and very young. Health officials say they need to get information to young adults in the channels that they use, such as social media.
The CDC is also dabbling with using games and virtual worlds to get information out. It has released a flu game into Whyville, a virtual world for tweens. Players can catch the "Why-Flu" by sneezing and talking in close proximity to avatars who haven’t been vaccinated. Whyville avatars who catch the electronic flu can’t talk. The game teaches good hygiene and health practices.
Grandparents often go on Whyville to spend time with their grandchildren so the game also exposes older people–another high-risk group–to the health information as well.
UberOps to present at the 2009 CDC PHIN Conference in Atlanta August 21, 2009
Posted by gonzalezloumiet in CDC, PHIN.Tags: CDC, Pan Flu, PHIN
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The CDC Public Health Information Network (PHIN) is a national initiative to improve the capacity of public health to use and exchange information electronically by promoting the use of standards, defining functional and technical requirements.
PHIN strives to improve public health by enhancing research and practice through best practices related to efficient, effective, and interoperable public health information systems.
CDC’s role in PHIN is:
- Supporting the exchange of critical health information between all levels of public health and healthcare,
- Developing and promulgating requirements, standards, specifications, and an overall architecture in a collaborative, transparent, and dynamic way,
- Monitoring the capability of state and local health departments to exchange information,
- Advancing supportive policy,
- Providing technical assistance to state and local health departments, and
- Facilitating communication and information sharing within the PHIN community.
Information on Uber Operations team members presenting at the conference:
Implementing Two Interoperable PHINMS RnR Hubs to Support Laboratory Data Exchange
Open Source Data Integration Solutions for PHIN Based Architecture
Hope to see you there.





